Published research

Selected publications (newest first):

  • Bartas, M., Goswami, P., Lexa, M., Červeň, J., Volná, A., Fojta, M., Brázda, V., Pečinka, P. 2021. Letter to the Editor: Significant mutation enrichment in inverted repeat sites of new SARS-CoV-2 strains. Briefings in Bioinformatics. https://academic.oup.com/bib/advance-article/doi/10.1093/bib/bbab129/6219140?login=true
  • Bohálová, N., Cantara, A., Bartas, M., Kaura, P., Šťastný, J., Pečinka, P., Fojta, M., Mergny, J.L., Brázda, V. 2021. Analyses of viral genomes for G-quadruplex forming sequences reveal their correlation with the type of infection. Biochimie. https://www.sciencedirect.com/science/article/pii/S0300908421000961
  • Bohálová, N., Cantara, A., Bartas, M., Kaura, P., Šťastný, J., Pečinka, P., Fojta, M., Brázda, V., 2021. Tracing dsDNA Virus–Host Coevolution through Correlation of Their G-Quadruplex-Forming Sequences. International Journal of Molecular Sciences, 22(7), 3433. https://www.mdpi.com/1422-0067/22/7/3433
  • Bartas, M., Červeň, J., Guziurová, S., Slychko, K., Pečinka, P., 2021. Amino Acid Composition in Various Types of Nucleic Acid-Binding Proteins. International Journal of Molecular Sciences 22, 922. https://doi.org/10.3390/ijms22020922
  • Goswami, P., Bartas, M., Lexa, M., Bohálová, N., Volná, A., Červeň, J., Červeňová, V., Pečinka, P., Špunda, V., Fojta, M., Brázda, V., 2020. SARS-CoV-2 hot-spot mutations are significantly enriched within inverted repeats and CpG island loci. Briefings in Bioinformatics. https://doi.org/10.1093/bib/bbaa385
  • Bartas, M., Brázda, V., Bohálová, N., Cantara, A., Volná, A., Stachurová, T., Malachová, K., Jagelská, E.B., Porubiaková, O., Červeň, J., Pečinka, P., 2020. In-depth bioinformatic analyses of Nidovirales including human SARS-CoV-2, SARS-CoV, MERS-CoV viruses suggest important roles of non-canonical nucleic acid structures in their lifecycles. Frontiers in Microbiology 11, 1583. https://www.frontiersin.org/articles/10.3389/fmicb.2020.01583/full
  • Bartas, M., Brázda, V., Červeň, J., Pečinka, P., 2020. Characterization of p53 Family Homologs in Evolutionary Remote Branches of Holozoa. International Journal of Molecular Sciences 21, 6. https://www.mdpi.com/1422-0067/21/1/6/htm
  • Bartas, M, Bažantová, P., Brázda, V., Liao, J., Červeň, J., Pečinka, P., 2019. Identification of distinct amino acid composition of human cruciform binding proteins. Molecular Biology 53, 97–106. http://molecbio.ru/?view=article&id=7766
  • Bartas, Martin, Čutová, M., Brázda, V., Kaura, P., Št’astný, J., Kolomazník, J., Coufal, J., Goswami, P., Červeň, J., Pečinka, P., 2019. The presence and localization of G-quadruplex forming sequences in the domain of bacteria. Molecules 24, 1711. https://www.mdpi.com/1420-3049/24/9/1711/htm
  • Bartas, Martin, Brázda, V., Karlický, V., Červeň, J., Pečinka, P., 2018. Bioinformatics analyses and in vitro evidence for five and six stacked G-quadruplex forming sequences. Biochimie 150, 70–75. https://www.sciencedirect.com/science/article/abs/pii/S0300908418301251
  • Bartas, Martin, Červeň, J., Oppelt, J., Peteja, M., Vávra, P., Zonča, P., Procházka, V., Brázda, V., Pečinka, P., 2018. Liver regeneration during the associating liver partition and portal vein ligation for staged hepatectomy procedure in Sus scrofa is positively modulated by stem cells. Oncology letters 15, 6309–6321. https://www.spandidos-publications.com/10.3892/ol.2018.8108
  • Brázda, V., Červeň, J., Bartas, M., Mikysková, N., Coufal, J., Pečinka, P., 2018. The amino acid composition of quadruplex binding proteins reveals a shared motif and predicts new potential quadruplex interactors. Molecules 23, 2341. https://www.mdpi.com/1420-3049/23/9/2341/htm